• Experimental evidence of threat-sensitive collective avoidance responses in a large wild-caught herring school 

      Rieucau, Guillaume; Boswell, Kevin M.; De Robertis, Alex; Macaulay, Gavin; Handegard, Nils Olav (Peer reviewed; Journal article, 2014)
      Aggregation is commonly thought to improve animals’ security. Within aquatic ecosystems, group-living prey can learn about immediate threats using cues perceived directly from predators, or from collective behaviours, for ...
    • Final report for the REDUS project - Reduced Uncertainty in Stock Assessment 

      Olsen, Erik Joel Steinar; Aanes, Sondre; Aldrin, Magne Tommy; Breivik, Olav Nikolai; Fuglebakk, Edvin; Goto, Daisuke; Handegard, Nils Olav; Hansen, Cecilie; Holmin, Arne Johannes; Howell, Daniel; Johnsen, Espen; Jourdain, Natoya; Korsbrekke, Knut; Ono, Kotaro; Otterå, Håkon Magne; Perryman, Holly Ann; Subbey, Samuel; Søvik, Guldborg; Umar, Ibrahim; Vatnehol, Sindre; Vølstad, Jon Helge (Rapport fra havforskningen;2021 - 16, Research report, 2021)
      The REDUS project (2016-2020) has been a strategic project at the Institute of Marine Research (IMR) aimed at quantifying and reducing the uncertainty in data-rich and age-structured stock assessments (e.g., cod, herring, ...
    • Fisheries acoustics and Acoustic Target Classification - Report from the COGMAR/CRIMAC workshop on machine learning methods in fisheries acoustics 

      Handegard, Nils Olav; Andersen, Lars Nonboe; Brautaset, Olav; Choi, Changkyu; Eliassen, Inge Kristian; Heggelund, Yngve; Hestnes, Arne Johan; Malde, Ketil; Osland, Håkon; Ordonez, Alba; Patel, Ruben; Pedersen, Geir; Umar, Ibrahim; Engeland, Tom Van; Vatnehol, Sindre (Rapport fra havforskningen;2021 - 25, Research report, 2021)
      This report documents a workshop organised by the COGMAR and CRIMAC projects. The objective of the workshop was twofold. The first objective was to give an overview of ongoing work using machine learning for Acoustic Target ...
    • From siphonophores to deep scattering layers: Uncertainty ranges for the estimation of global mesopelagic fish biomass 

      Proud, Roland; Handegard, Nils Olav; Kloser, Rudy; Cox, Martin J.; Brierley, Andrew S. (Peer reviewed; Journal article, 2019)
      The mesopelagic community is important for downward oceanic carbon transportation and is a potential food source for humans. Estimates of global mesopelagic fish biomass vary substantially (between 1 and 20 Gt). Here, we ...
    • How to obtain clear images from in-trawl cameras near the seabed? A case study from the Barents Sea demersal fishing grounds 

      Tenningen, Maria; Rosen, Shale; Westergerling, Eugenie Heliana Taraneh; Handegard, Nils Olav (Peer reviewed; Journal article, 2023)
      Underwater camera systems are commonly used for monitoring fish and fishing gear behaviours. More recently, camera systems have been applied to scientific trawl surveys for improved spatial resolution and less invasive ...
    • Joint survey report for CRIMAC SFI and IMR sampling gear project 

      Handegard, Nils Olav; Tenningen, Maria (Toktrapport;2022 - 3, Research report, 2022)
      In this report we present main activities and preliminary results from the joint survey for the CRIMAC sfi and IMR sampling gear project. The survey was conducted on board RV G.O. Sars between 1. and 21. November and the ...
    • Machine intelligence and the data-driven future of marine science 

      Malde, Ketil; Handegard, Nils Olav; Eikvil, Line; Salberg, Arnt Børre (Peer reviewed; Journal article, 2019)
      Oceans constitute over 70% of the earth’s surface, and the marine environment and ecosystems are central to many global challenges. Not only are the oceans an important source of food and other resources, but they also ...
    • Machine Learning + Marine Science: Critical Role of Partnerships in Norway 

      Handegard, Nils Olav; Eikvil, Line; Jenssen, Robert; Kampffmeyer, Michael; Salberg, Arnt Børre; Malde, Ketil (Others, 2021)
      In this essay, we review some recent advances in developing machine learning (ML) methods for marine science applications in Norway. We focus mostly on deep learning (DL) methods and review the challenges we have faced in ...
    • Machine learning in marine ecology: an overview of techniques and applications 

      Rubbens, Peter; Brodie, Stephanie; Cordier, Tristan; Desto Barcellos, Diogo; DeVos, Paul; Fernandes-Salvador, Jose A; Fincham, Jennifer; Gomes, Alessandra; Handegard, Nils Olav; Howell, Kerry L.; Jamet, Cédric; Kartveit, Kyrre Heldal; Moustahfid, Hassan; Parcerisas, Clea; Politikos, Dimitris V.; Sauzède, Raphaëlle; Sokolova, Maria; Uusitalo, Laura; Van den Bulcke, Laure; van Helmond, Aloysius; Watson, Jordan T.; Welch, Heather; Beltran-Perez, Oscar; Chaffron, Samuel; Greenberg, David S.; Kühn, Bernhard; Kiko, Rainer; Lo, Madiop; Lopes, Rubens M.; Möller, Klas Ove; Michaels, William; Pala, Ahmet; Romagnan, Jean-Baptiste; Schuchert, Pia; Seydi, Vahid; Villasante, Sebastian; Malde, Ketil; Irisson, Jean-Olivier (Peer reviewed; Journal article, 2023)
      Machine learning covers a large set of algorithms that can be trained to identify patterns in data. Thanks to the increase in the amount of data and computing power available, it has become pervasive across scientific ...
    • The One Ocean Expedition: Science and Sailing for the Ocean We Want 

      Huse, Geir; Baussant, Thierry; Becker, Meike; Biuw, Martin; Bødtker, Gunhild; Cook, Jeremy; Gomiero, Alessio; Grøsvik, Bjørn Einar; Handegard, Nils Olav; Hestnes, Arne Johan; Hole, Lars Robert; Husson, Berengere; Jaccard, Pierre Franqois; Johannessen, Johnny Andre; Krolicka, Adriana; Lien, Vidar Surén; Lindemann, Christian; Olsen, Are; Renner, Angelika; Lid, Sjur Ringheim; Steen-Larsen, Hans Christian; Strand, Espen; Westgaard, Jon-Ivar; Pedersen, Geir (Rapport fra havforskningen;2023 - 34, Research report, 2023)
      The One Ocean Expedition (OOE) was a 20-month long circumnavigation of the globe by the Norwegian sail training vessel Statsraad Lehmkuhl, and a recognised part of the UN decade of Ocean Science for Sustainable Development. ...
    • PELFOSS (PELagic Fish Observation System Simulator) 

      Skogen, Morten D.; Handegard, Nils Olav; Holmin, Arne Johannes; Hjøllo, Solfrid Sætre; Mousing, Erik Askov; Utne, Kjell Rong; Vabø, Rune (Rapport fra havforskningen;30-2018, Research report, 2018)
      PELFOSS har utviklet en observasjonssystem-simulator for pelagisk fisk i Norskehavet. Simulatoren er en dataløype der romlig fordeling av fiskebestander fra en økosystemmodell er benyttet til å simulere ulike tokt. Disse ...
    • Quantitative processing of broadband data as implemented in a scientific split-beam echosounder 

      Andersen, Lars Nonboe; Chu, Dezhang; Handegard, Nils Olav; Heimvoll, Harald; Korneliussen, Rolf; Macaulay, Gavin; Ona, Egil; Patel, Ruben; Pedersen, Geir (Peer reviewed; Journal article, 2023)
      The use of quantitative broadband echosounders for biological studies and surveys can offer considerable advantages over narrowband echosounders. These include improved spectral-based target identification and significantly ...
    • Semi-supervised target classification in multi-frequency echosounder data 

      Choi, Changkyu; Kampffmeyer, Michael; Handegard, Nils Olav; Salberg, Arnt Børre; Brautaset, Olav; Eikvil, Line; Jenssen, Robert (Peer reviewed; Journal article, 2021)
      Acoustic target classification in multi-frequency echosounder data is a major interest for the marine ecosystem and fishery management since it can potentially estimate the abundance or biomass of the species. A key problem ...
    • Spawning Atlantic cod (Gadus morhua L.) exposed to noise from seismic airguns do not abandon their spawning site 

      McQueen, Kate; Meager, Justin James; Nyqvist, Daniel; Skjæraasen, Jon Egil; Olsen, Esben Moland; Karlsen, Ørjan; Kvadsheim, Petter Helgevold; Handegard, Nils Olav; Sivle, Lise Doksæter; Forland, Tonje Nesse (Peer reviewed; Journal article, 2022)
      Seismic airgun surveys may disturb and displace fish at large ranges. If such displacement causes fish to abandon spawning grounds, reproductive success could be impacted. To investigate whether airgun sound causes cod ...
    • StoX: An open source software for marine survey analyses 

      Johnsen, Espen; Totland, Atle; Skålevik, Åsmund; Holmin, Arne Johannes; Dingsør, Gjert Endre; Fuglebakk, Edvin; Handegard, Nils Olav (Journal article; Peer reviewed, 2019)
      Scientists across the globe conduct survey programs to monitor and characterize abundance, population structure, biodiversity and geographical distributions. To assess the state of marine fish and zooplankton, population ...
    • Survey report for CRIMAC SFI 2023 

      Handegard, Nils Olav; Allken, Vaneeda; Holmin, Arne Johannes; Johnsen, Espen; Korneliussen, Rolf; Pedersen, Geir; Skjefstad, Joakim; Rogge, Rabea Patricia; Samuelsen, Mikal Arntzen; Tenningen, Maria; Sivle, Lise Doksæter (Toktrapport;2024 - 7, Research report, 2024)
      This cruise report describes the objectives, methods, and preliminary results from the tasks carried out at the CRIMAC SFI survey. The survey was conducted on board RV G.O. Sars between November 15th (Tromsø) and November ...